ProteinMotion
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MODULE · v0.9.1

Molecular interactions

proteinmotion.interactions

Compute and display hydrogen bonds and screened Coulomb interactions.

Guide and rendered examples →

Classes

NameDescription
HydrogenBondsclassDetect hydrogen bonds from donor–acceptor distance and hydrogen geometry.
ElectrostaticsclassCompute screened Coulomb pair energies and electrostatic potential.
InteractionclassAn immutable record for one detected molecular interaction.
InteractionHighlightclassDraw selected hydrogen-bond or electrostatic contact lines.

Functions

NameDescription
charges_from_pqr()functionMatch PQR charges to the protein’s atom identities.
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